Philippine Payroll/Government Contributions
Philippine Payroll Guide

Mandatory Government Contributions

SSS, PhilHealth, Pag-IBIG, and ECC — how to compute, remit, and stay compliant with the four mandatory social programs every Philippine employer must manage every month.

Silent liability builds fast: Contribution rates change every few years, each agency has its own portal and deadline, and missed or under-remitted contributions accumulate 2% monthly penalties. In severe cases, SSS non-remittance can trigger criminal liability against company officers.

Who This Applies To

Every private-sector employer must register with all four agencies and remit monthly contributions for every eligible employee — regular, probationary, project-based, or fixed-term. Kasambahay employers must register domestic workers with all three agencies.

Register before the first payroll cycle. Failure to register within the required period exposes the employer to penalties and potentially retroactive contributions from the start of the engagement.

The Four Mandatory Agencies

SSS

Social Security System

15% of MSC

Employer: 10% · Employee: 5%
MSC range: ₱5,000–₱35,000
Max employee share: ₱1,750/mo
Max employer share: ₱3,500/mo

RA 11199 · 15% is the final scheduled increase

PhilHealth

PhilHealth

5% of monthly salary

Employer: 2.5% · Employee: 2.5%
Floor: ₱10,000 (min ₱500 total)
Ceiling: ₱100,000 (max ₱5,000 total)

RA 11223 · Universal Health Care Act

Pag-IBIG

Pag-IBIG (HDMF)

Max ₱200 each

MFS ceiling: ₱10,000
≤₱1,500: 1% employee, 2% employer
>₱1,500: 2% employee, 2% employer

HDMF Circular No. 460 · eff. Feb 2024

ECC

Employees' Compensation Commission

Employer-paid only

MSC ≤₱14,500: ₱10/month
MSC ≥₱15,000: ₱30/month

Remitted with SSS — no employee share

Covers work-related injury, illness, disability, death

Sample Monthly Computation — ₱35,000/month Employee

ContributionEmployee ShareEmployer ShareTotal
SSS (MSC ₱35,000, 15% rate)₱1,750₱3,500₱5,250
PhilHealth (5% × ₱35,000)₱875₱875₱1,750
Pag-IBIG (capped at ₱10,000 MFS)₱200₱200₱400
ECC (MSC ≥₱15,000)—₱30₱30
Total₱2,825₱4,605₱7,430

True employer cost: The true monthly cost of this ₱35,000 employee is ₱39,605 before 13th month and other benefits — an effective uplift of roughly 13% on base salary. Plan this into hiring budgets from day one.

Remittance Portals & Deadlines

Payments without the correct reference number are not posted against specific employees — they remain "unallocated," leaving the employer on record as non-compliant even though the money was paid.

AgencyPortalReference NeededDeadline
SSSMy.SSSPRN (Payment Reference Number)Last day of following month (by 10th digit of employer number)
PhilHealthEPRSSPA (Statement of Premium Account)Last working day of the following month
Pag-IBIGVirtual Pag-IBIGEmployer's ID10th–15th of following month (varies by category)
ECCBundled with SSSSame PRN as SSSSame as SSS

How It Works in Practice

1

The Silent Non-Remittance Problem

An SME misses two months of SSS contributions during an accounting team transition. Eventually paid but without the correct PRN — SSS considers them unposted. When an employee later applies for sickness benefits, SSS denies the claim citing "no posted contributions."

Outcome: Employer ordered to pay missing contributions with 2% monthly penalties, shoulder the benefit owed to the employee (Section 24, RA 11199), and face potential criminal prosecution. Always remit with the correct PRN.

2

Misclassified Contractor — Three Years of Retroactive Contributions

An SME engages a "freelancer" for three years without remitting contributions. During a DOLE case, the worker is reclassified as a regular employee.

Outcome: Employer must pay three years of retroactive SSS, PhilHealth, and Pag-IBIG (both shares), plus penalties, interest, and potential criminal exposure. One of the most expensive consequences of misclassification.

Common Mistakes

  • 1. Using outdated contribution tables. SSS, PhilHealth, and Pag-IBIG have all seen changes in recent years. Payroll systems not updated since 2023 are likely computing contributions incorrectly.
  • 2. Applying Pag-IBIG against actual salary instead of the ₱10,000 MFS cap. A common error: deducting 2% of ₱50,000 salary (₱1,000) instead of 2% of ₱10,000 (₱200). This over-deducts from employees.
  • 3. Under-remitting PhilHealth at older rates. Some SMEs are still computing PhilHealth at 3% or 4%. The 5% rate has been in effect since 2024.
  • 4. Paying without a PRN or SPA. Payments without the correct reference are not posted — agencies receive the money, but employees cannot claim benefits.
  • 5. Not registering kasambahays. Household employers must register domestic workers (yayas, drivers, cooks) with SSS, PhilHealth, and Pag-IBIG.
  • 6. Delayed registration of new hires. Employees must be reported to each agency within the required period. Delayed registration means no coverage during the gap.
  • 7. Treating ECC as optional. ECC is small (₱10–₱30/month) but mandatory. Non-remittance affects employee eligibility for work-related injury benefits.
  • 8. Not segregating the WISP/MPF layer for high earners. Employees with MSC above ₱20,000 have part of their SSS contribution directed to the provident fund — misreporting affects future benefit computations.

Key Deadlines & Checklist

Contributions Compliance Checklist

Track across hire events, monthly cycles, and annual filings

At Every New HireRegister employee with SSS and report under employer accountEnroll in PhilHealth via EPRSReport to Pag-IBIG via Virtual Pag-IBIGUpdate employee's MSC and contribution tables in payroll systemEvery MonthGenerate PRN (SSS), SPA (PhilHealth), and Pag-IBIG referenceDeduct correct employee share based on current ratesRemit total contributions before each agency's deadlineRetain proof of payment for BIR audit (10-year retention)Every JanuaryVerify rates: SSS 15%, PhilHealth 5%, Pag-IBIG ₱10,000 MFS capReconcile prior-year contributions against employee recordsUpdate MSC for employees with prior-year salary increasesAnnual FilingsFile SSS R-3 and R-5 contribution returnsSubmit PhilHealth RF-1 Employer's Remittance ReportReconcile Pag-IBIG remittances against M1-1 and M1-2 forms

Frequently Asked Questions

Do I have to pay contributions for employees on unpaid leave?

If an employee earns no compensation in a given month, no employee share is deducted. However, some employers continue paying the employer share for goodwill. Confirm with each agency's rules for extended leave cases.

What happens if I miss a contribution deadline?

Late remittances accumulate penalties (typically 2% per month on unpaid amounts). Missed contributions also affect employee benefit claims.

Can I deduct the employer share from the employee's salary?

No. The employer share is a cost to the business. Deducting any portion from employee salary is prohibited and can result in labor complaints and penalties.

Are employee contributions tax-deductible for the employee?

Yes. SSS, PhilHealth, and Pag-IBIG employee contributions are deducted from gross income before computing withholding tax — reducing taxable compensation.

How are contributions computed for semi-monthly payroll?

The monthly contribution is split across the two cutoffs. For example, a ₱400 Pag-IBIG contribution becomes ₱200 per cutoff. The total monthly amount must match the applicable bracket.

Do I contribute for a foreign national employee?

SSS and PhilHealth: yes. Pag-IBIG: optional for foreign nationals. Tax treaty or totalization agreements may modify SSS coverage in specific cases.

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